https://beikolab.cs.dal.ca/software/index.php?title=NetworkDiversity&feed=atom&action=history
NetworkDiversity - Revision history
2024-03-29T08:58:34Z
Revision history for this page on the wiki
MediaWiki 1.34.0
https://beikolab.cs.dal.ca/software/index.php?title=NetworkDiversity&diff=1116&oldid=prev
Dparks at 04:14, 6 March 2013
2013-03-06T04:14:13Z
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 04:14, 6 March 2013</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l10" >Line 10:</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Network Diversity is freely available, open source software released under [http://www.gnu.org/licenses/gpl.html GNU GPL v3]. A precompiled binary is provided for Windows and simple compilation instructions described for OSX and Linux.</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Network Diversity is freely available, open source software released under [http://www.gnu.org/licenses/gpl.html GNU GPL v3]. A precompiled binary is provided for Windows and simple compilation instructions described for OSX and Linux.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [[Media:NetDiv_1_0_0.zip|NetworkDiversity v1.0.0 binaries and source code]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [[Media:NetDiv_1_0_0.zip|NetworkDiversity v1.0.0 binaries and source code]]</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* [https://github.com/dparks1134/NetworkDiversity Source code <del class="diffchange diffchange-inline">from </del>GitHub]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* [https://github.com/dparks1134/NetworkDiversity Source code <ins class="diffchange diffchange-inline">on </ins>GitHub]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Citing Network Diversity ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Citing Network Diversity ==</div></td></tr>
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Dparks
https://beikolab.cs.dal.ca/software/index.php?title=NetworkDiversity&diff=1115&oldid=prev
Dparks at 04:13, 6 March 2013
2013-03-06T04:13:59Z
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 04:13, 6 March 2013</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l10" >Line 10:</td>
<td colspan="2" class="diff-lineno">Line 10:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Network Diversity is freely available, open source software released under [http://www.gnu.org/licenses/gpl.html GNU GPL v3]. A precompiled binary is provided for Windows and simple compilation instructions described for OSX and Linux.</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Network Diversity is freely available, open source software released under [http://www.gnu.org/licenses/gpl.html GNU GPL v3]. A precompiled binary is provided for Windows and simple compilation instructions described for OSX and Linux.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [[Media:NetDiv_1_0_0.zip|NetworkDiversity v1.0.0 binaries and source code]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [[Media:NetDiv_1_0_0.zip|NetworkDiversity v1.0.0 binaries and source code]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">* [https://github.com/dparks1134/NetworkDiversity Source code from GitHub]</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Citing Network Diversity ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Citing Network Diversity ==</div></td></tr>
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Dparks
https://beikolab.cs.dal.ca/software/index.php?title=NetworkDiversity&diff=1073&oldid=prev
Dparks: /* Citing Network Diversity */
2012-08-02T16:39:18Z
<p><span dir="auto"><span class="autocomment">Citing Network Diversity</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 16:39, 2 August 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l15" >Line 15:</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>If you use Network Diversity in your research, please cite:</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>If you use Network Diversity in your research, please cite:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Parks, D.H. and Beiko, R.G. ''Measuring community similarity with phylogenetic networks''. <del class="diffchange diffchange-inline">(submitted </del>to Mol. Biol. Evol., <del class="diffchange diffchange-inline">April</del>, 2012<del class="diffchange diffchange-inline">)</del>.</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Parks, D.H. and Beiko, R.G. ''Measuring community similarity with phylogenetic networks''. <ins class="diffchange diffchange-inline">Accepted </ins>to Mol. Biol. Evol., <ins class="diffchange diffchange-inline">July</ins>, 2012.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Contact Information ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Contact Information ==</div></td></tr>
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Dparks
https://beikolab.cs.dal.ca/software/index.php?title=NetworkDiversity&diff=1022&oldid=prev
Dparks: New page: __NOTOC__ Network Diversity is a software package for calculating beta diversity over split systems, a widely used class of implicit phylogenetic networks. === Documentation === * [[Medi...
2012-04-21T12:23:16Z
<p>New page: __NOTOC__ Network Diversity is a software package for calculating beta diversity over split systems, a widely used class of implicit phylogenetic networks. === Documentation === * [[Medi...</p>
<p><b>New page</b></p><div>__NOTOC__<br />
Network Diversity is a software package for calculating beta diversity over split systems, a widely used class of implicit phylogenetic networks. <br />
<br />
=== Documentation ===<br />
* [[Media:README_NetworkDiversity.txt|Installation and program usage]]<br />
* [[Supported beta-diversity Measures|List of supported beta-diversity measures]]<br />
* [[Network Diversity version history|Version history]]<br />
<br />
=== Downloads ===<br />
Network Diversity is freely available, open source software released under [http://www.gnu.org/licenses/gpl.html GNU GPL v3]. A precompiled binary is provided for Windows and simple compilation instructions described for OSX and Linux.<br />
* [[Media:NetDiv_1_0_0.zip|NetworkDiversity v1.0.0 binaries and source code]]<br />
<br />
== Citing Network Diversity ==<br />
<br />
If you use Network Diversity in your research, please cite:<br />
<br />
Parks, D.H. and Beiko, R.G. ''Measuring community similarity with phylogenetic networks''. (submitted to Mol. Biol. Evol., April, 2012).<br />
<br />
== Contact Information ==<br />
<br />
Network Diversity is in active development and we are interested in discussing all potential applications of this software. We encourage you to send us suggestions for new features. Suggestions, comments, and bug reports can be sent to Donovan Parks (parks [at] cs.dal.ca) or Robert Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as possible and a simplified version of the data set which causes the bug. This will allow us to quickly resolve the issue. <br />
<br />
== Funding ==<br />
<br />
* [http://www.genomeatlantic.ca Genome Atlantic]<br />
* [http://www.nserc.ca The Natural Sciences and Engineering Research Council of Canada]<br />
* The Dalhousie [http://cs.dal.ca Faculty of Computer Science]<br />
* [http://www.killamtrusts.ca/ The Killam Trusts]<br />
* [http://www.innovation.ca/ The Canada Foundation for Innovation]<br />
* [http://www.tula.org/ The Tula Foundation]</div>
Dparks