Difference between revisions of "Genome Research Datasets"

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(New page: GOS dataset HIV-1 dataset mtDNA dataset)
 
 
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GOS dataset
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The following datasets were analyzed in ''GenGIS: A geospatial information system for genomic data'' (Parks et al., Genome Res., 2009):
  
HIV-1 dataset
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*[[Media:Gos_atlantic.zip|GOS dataset]]: taxonomic diversity of Atlanatic seaboard sites from the Global Ocean Sampling expedition.
  
mtDNA dataset
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*[[Media:Africa_hiv.zip|HIV-1 dataset]]: geographic distribution of non-recombinant HIV-1 subtypes in Africa
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*[[Media:ISEA_mtDNA.zip|ISEA mtDNA dataset]]: phylogenetic distribution of mtDNA haplogroup E, using hypervariable segment I (HVS-I) sequences from Southeast Asia.

Latest revision as of 15:04, 17 July 2009

The following datasets were analyzed in GenGIS: A geospatial information system for genomic data (Parks et al., Genome Res., 2009):

  • GOS dataset: taxonomic diversity of Atlanatic seaboard sites from the Global Ocean Sampling expedition.
  • HIV-1 dataset: geographic distribution of non-recombinant HIV-1 subtypes in Africa
  • ISEA mtDNA dataset: phylogenetic distribution of mtDNA haplogroup E, using hypervariable segment I (HVS-I) sequences from Southeast Asia.