Difference between revisions of "Genome Research Datasets"

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*** In progress: will be posted by the end of Friday, July 17 ***
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The following datasets were analyzed in GenGIS: A geospatial information system for genomic data (Parks et al., Genome Res., 2009).
  
GOS dataset
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[[Media:Gos_atlantic.zip|GOS Dataset]]: taxonomic diversity of Atlanatic seaboard sites from the Global Ocean Sampling expedition.
  
HIV-1 dataset
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[[Media:Africa_hiv.zip|HIV-1 dataset]]: geographic distribution of non-recombinant HIV-1 subtypes in Africa
  
mtDNA dataset
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[[Media:ISEA_mtDNA.zip|ISEA mtDNA dataset]]: phylogenetic distribution of mtDNA haplogroup E, using hypervariable segment I (HVS-I) sequences from Southeast Asia.

Revision as of 15:03, 17 July 2009

The following datasets were analyzed in GenGIS: A geospatial information system for genomic data (Parks et al., Genome Res., 2009).

GOS Dataset: taxonomic diversity of Atlanatic seaboard sites from the Global Ocean Sampling expedition.

HIV-1 dataset: geographic distribution of non-recombinant HIV-1 subtypes in Africa

ISEA mtDNA dataset: phylogenetic distribution of mtDNA haplogroup E, using hypervariable segment I (HVS-I) sequences from Southeast Asia.