Difference between revisions of "EBD version history"
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* Added automatic generation of hierarchical cluster trees. | * Added automatic generation of hierarchical cluster trees. | ||
* Minor improvements to program output. | * Minor improvements to program output. | ||
| + | * [[Media:EBD_1_0_4.zip|EBD v1.0.4 binaries and source code]] | ||
=== 1.0.3 (Feb. 5, 2013) === | === 1.0.3 (Feb. 5, 2013) === | ||
* Added functionality to project (prune) a tree to a specific set of taxa. | * Added functionality to project (prune) a tree to a specific set of taxa. | ||
| + | * [[Media:EBD_1_0_3.zip|EBD v1.0.3 binaries and source code]] | ||
=== 1.0.2 (Feb. 1, 2013) === | === 1.0.2 (Feb. 1, 2013) === | ||
| Line 14: | Line 16: | ||
* Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD. | * Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD. | ||
* Added a Python script for converting UniFrac formatted sample data into the format required by EBD. | * Added a Python script for converting UniFrac formatted sample data into the format required by EBD. | ||
| + | * [[Media:EBD_1_0_2.zip|EBD v1.0.2 binaries and source code]] | ||
=== 1.0.1 (June 8, 2012) === | === 1.0.1 (June 8, 2012) === | ||
Revision as of 04:31, 3 June 2013
Contents
1.0.4 (May 24, 2013)
- Added support to produce jackknife values.
- Added automatic pruning of input trees to sequences in OTU table.
- Added automatic generation of hierarchical cluster trees.
- Minor improvements to program output.
- EBD v1.0.4 binaries and source code
1.0.3 (Feb. 5, 2013)
- Added functionality to project (prune) a tree to a specific set of taxa.
- EBD v1.0.3 binaries and source code
1.0.2 (Feb. 1, 2013)
- Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD.
- Added a Python script for converting UniFrac formatted sample data into the format required by EBD.
- EBD v1.0.2 binaries and source code
1.0.1 (June 8, 2012)
- Added check to ensure only valid weighted and unweighted measures can be computed.
1.0.0 (Feb. 1, 2012)
- EBD v1.0.0 binaries and source code
- First public release.
