Difference between revisions of "EBD version history"
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| + | === 1.0.6 (Oct. 7, 2014) === | ||
| + | |||
| + | * Improved support for taxon-based beta diversity calculators. | ||
| + | * Fixed compiler errors under GCC >= 4.6.8. | ||
| + | * [https://github.com/dparks1134/ExpressBetaDiversity/releases GitHub Release] | ||
| + | |||
| + | === 1.0.5 (June 27, 2014) === | ||
| + | |||
| + | * Improved support for parsing Newick trees with missing branch length information. | ||
| + | * [https://github.com/dparks1134/ExpressBetaDiversity/releases GitHub Release] | ||
| + | |||
| + | === 1.0.4 (May 24, 2013) === | ||
| + | |||
| + | * Added support to produce jackknife values. | ||
| + | * Added automatic pruning of input trees to sequences in OTU table. | ||
| + | * Added automatic generation of hierarchical cluster trees. | ||
| + | * Minor improvements to program output. | ||
| + | * [[Media:EBD_1_0_4.zip|EBD v1.0.4 binaries and source code]] | ||
| + | |||
| + | === 1.0.3 (Feb. 5, 2013) === | ||
| + | |||
| + | * Added functionality to project (prune) a tree to a specific set of taxa. | ||
| + | * [[Media:EBD_1_0_3.zip|EBD v1.0.3 binaries and source code]] | ||
| + | |||
| + | === 1.0.2 (Feb. 1, 2013) === | ||
| + | |||
| + | * Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD. | ||
| + | * Added a Python script for converting UniFrac formatted sample data into the format required by EBD. | ||
| + | * [[Media:EBD_1_0_2.zip|EBD v1.0.2 binaries and source code]] | ||
| + | |||
=== 1.0.1 (June 8, 2012) === | === 1.0.1 (June 8, 2012) === | ||
* Added check to ensure only valid weighted and unweighted measures can be computed. | * Added check to ensure only valid weighted and unweighted measures can be computed. | ||
| + | * [[Media:EBD_1_0_1.zip|EBD v1.0.1 binaries and source code]] | ||
=== 1.0.0 (Feb. 1, 2012) === | === 1.0.0 (Feb. 1, 2012) === | ||
| + | * [[Media:EBD_1_0_0.zip|EBD v1.0.0 binaries and source code]] | ||
* First public release. | * First public release. | ||
Latest revision as of 22:22, 6 October 2014
Contents
1.0.6 (Oct. 7, 2014)
- Improved support for taxon-based beta diversity calculators.
- Fixed compiler errors under GCC >= 4.6.8.
- GitHub Release
1.0.5 (June 27, 2014)
- Improved support for parsing Newick trees with missing branch length information.
- GitHub Release
1.0.4 (May 24, 2013)
- Added support to produce jackknife values.
- Added automatic pruning of input trees to sequences in OTU table.
- Added automatic generation of hierarchical cluster trees.
- Minor improvements to program output.
- EBD v1.0.4 binaries and source code
1.0.3 (Feb. 5, 2013)
- Added functionality to project (prune) a tree to a specific set of taxa.
- EBD v1.0.3 binaries and source code
1.0.2 (Feb. 1, 2013)
- Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD.
- Added a Python script for converting UniFrac formatted sample data into the format required by EBD.
- EBD v1.0.2 binaries and source code
1.0.1 (June 8, 2012)
- Added check to ensure only valid weighted and unweighted measures can be computed.
- EBD v1.0.1 binaries and source code
1.0.0 (Feb. 1, 2012)
- EBD v1.0.0 binaries and source code
- First public release.
