Difference between revisions of "SPR Supertrees version history"
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__NOTOC__ | __NOTOC__ | ||
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| + | ==1.1.1== | ||
| + | * Bugfix release | ||
| + | * Fixed a coding error that rarely computed one more than the SPR distance between two trees | ||
==1.1.0== | ==1.1.0== | ||
Revision as of 18:19, 21 January 2013
1.1.1
- Bugfix release
- Fixed a coding error that rarely computed one more than the SPR distance between two trees
1.1.0
- Trees can be multifurcating with -allow_multi option
- Much faster SPR distance calculations
- Many new options including collapsing unsupported bipartitions, fast consideration of unrooted trees with -simple_unrooted option, starting from a specified tree with -initial_tree option, limiting the radius of considered SPR permutations with -r option (-r 1 uses NNI permutations)
1.0.0
- initial program version.
- Computes rooted supertrees that minimize the rooted SPR distance using exact calculations or varying levels of approximation.
- Optionally computes rooted supertrees that minimize the SPR distance to any rooting of a list of unrooted input trees.
- Version used in "Subtree Prune-and-Regraft Supertrees."
