Difference between revisions of "STAMP example datasets"
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| − | '''Note''': additional datasets can be found in the ''examples'' folder of STAMP. | ||
Revision as of 23:46, 25 May 2014
The following data sets were analyzed in Parks, D.H. and Beiko, R.G. (2010). Identifying biologically relevant differences between metagenomic communities. Bioinformatics, 26, 715-721. (Abstract):
- SEED functional profile for Soudin iron mine metagenomes (data originally described in Edwards et al., 2006)
- SEED functional profile for Candidatus Accumulibacter phosphatis (data originally described in Martín et al., 2006)
The User's guide makes use of the following data set:
- SEED taxonomic profile for an obese and a lean mouse microbiome (data originally described in Turnbaugh et al., 2006)
Note: additional datasets can be found in the examples folder of STAMP or downloaded [here|].
