EBD version history
From Bioinformatics Software
Jump to navigationJump to searchOct. 7, 2014: EBD v1.0.6 release. Improved support for taxon-based beta diversity calculators. Fixed compiler errors under GCC >= 4.6.8. June 27, 2014: EBD v1.0.5 release. Improved support for parsing Newick trees with missing branch length information.
Contents
1.0.6 (Oct. 7, 2014)
- Added support to produce jackknife values.
- Added automatic pruning of input trees to sequences in OTU table.
- Added automatic generation of hierarchical cluster trees.
- Minor improvements to program output.
1.0.5 (June 27, 2014)
- Improved support for parsing Newick trees with missing branch length information.
- GitHub Release
1.0.4 (May 24, 2013)
- Added support to produce jackknife values.
- Added automatic pruning of input trees to sequences in OTU table.
- Added automatic generation of hierarchical cluster trees.
- Minor improvements to program output.
- EBD v1.0.4 binaries and source code
1.0.3 (Feb. 5, 2013)
- Added functionality to project (prune) a tree to a specific set of taxa.
- EBD v1.0.3 binaries and source code
1.0.2 (Feb. 1, 2013)
- Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD.
- Added a Python script for converting UniFrac formatted sample data into the format required by EBD.
- EBD v1.0.2 binaries and source code
1.0.1 (June 8, 2012)
- Added check to ensure only valid weighted and unweighted measures can be computed.
- EBD v1.0.1 binaries and source code
1.0.0 (Feb. 1, 2012)
- EBD v1.0.0 binaries and source code
- First public release.