Uploads by Dparks
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| Date | Name | Thumbnail | Size | Description | Versions |
|---|---|---|---|---|---|
| 17:47, 10 May 2011 | CreateProfileDlg.zip (file) |  |
2 KB | 4 | |
| 17:48, 10 May 2011 | CreateProfileDlg patch.zip (file) | |
2 KB | 1 | |
| 22:59, 4 August 2014 | CheckHierarchy.zip (file) | |
2 KB | 1 | |
| 04:30, 18 November 2009 | StampIcon.png (file) |  |
7 KB | Program icon by Caihua (http://commons.wikimedia.org/wiki/File:Fairytale_colors.png) | 1 |
| 21:40, 10 April 2012 | README NetworkDiversity.txt (file) |  |
8 KB | 1 | |
| 04:11, 3 June 2013 | README EBD.txt (file) | |
9 KB | 7 | |
| 14:14, 6 December 2011 | README.txt (file) | |
11 KB | Reverted to version as of 14:56, 3 November 2011 | 5 |
| 05:23, 22 November 2009 | IronMineSequenceHistogram.png (file) |  |
13 KB | Sequence histogram for a pair of iron mine metagenomes (data described in Edwards et al., 2006). | 1 |
| 05:52, 22 November 2009 | IronMine pValueHistogram.png (file) |  |
15 KB | p-value histogram for a pair of iron mine metagenomes (data described in Edwards et al., 2006). | 1 |
| 05:36, 22 November 2009 | MultipleComparisonPlots StoreyFDR.png (file) |  |
20 KB | Multiple comparison plots for analyzing the effects of Storey's false discovery rate method (see Leek and Storey, 2008). | 1 |
| 17:22, 6 March 2012 | RITA v1 0 1.zip (file) | |
25 KB | 1 | |
| 02:07, 8 December 2009 | MartinEBPR A phosphatis.spf (file) | |
41 KB | SEED functional profile for Candidatus Accumulibacter phosphatis (data originally described in Martín et al., 2006) . | 1 |
| 15:26, 17 July 2010 | EBPR Aphosphatis ScatterplotHistogram.png (file) |  |
43 KB | Scatterplot with histograms showing the functional profile of A.phosphatis sequences from EBPR communities in the USA and Australia. | 1 |
| 02:09, 8 December 2009 | MouseTurnbaughMG-RAST Functional.spf (file) | |
44 KB | SEED taxonomic profile for an obese and lean mouse microbiome (data originally described in Turnbaugh et al., 2006) . | 1 |
| 16:27, 29 November 2009 | EBPR ScatterPlot.png (file) |  |
46 KB | SEED subsystem scatter plot for a pair of enhanced biological phosphorus removal (EBPR) sludge metagenomes (data from Martín et al., 2006]). | 2 |
| 06:14, 22 November 2009 | MouseTurnbaugh.spf (file) | |
53 KB | Functional profile for an obese and lean mouse microbiome (data originally described in Turnbaugh et al., 2006). | 1 |
| 12:33, 11 August 2011 | ArumugamBoxPlot.png (file) |  |
55 KB | Box plot of Arumugam et al. enterotype data. | 1 |
| 03:41, 18 November 2009 | RedBlackErrorBar.png (file) |  |
56 KB | Using STAMP to identify SEED subsystems which are differentially abundant in a pair of iron mine metagenomes (data original described in Edwards et al., 2006). | 2 |
| 14:06, 11 August 2011 | STAMP2 IronMinSequenceHistogram.png (file) |  |
59 KB | Sequence histogram for a pair of iron mine metagenomes. | 1 |
| 16:24, 29 November 2009 | TurnbaughMouseProfilePlot.png (file) |  |
64 KB | Taxonomy profile plot for an obese and lean mouse microbiome(data from described in Turnbaugh et al., 2006). | 3 |
| 14:11, 11 August 2011 | STAMP2 IronMine pValueHistogram.png (file) |  |
66 KB | p-value histogram for two iron mine metagenomes | 1 |
| 12:33, 11 August 2011 | ArumugamPostHocPlot.png (file) |  |
67 KB | Post-hoc plot of Arumugam et al. enterotype data. | 1 |
| 14:02, 11 August 2011 | STAMP2 EBPR ScatterPlot.png (file) |  |
69 KB | SEED subsystem scatter plot for a pair of enhanced biological phosphorus removal (EBPR) sludge metagenomes. | 1 |
| 18:24, 9 February 2011 | FCP 1 0 0.tar.gz (file) | |
81 KB | FCP v1.0.0 | 9 |
| 14:18, 28 April 2011 | FCP 1 0 1.tar.gz (file) | |
82 KB | FCP v1.0.1 | 1 |
| 20:34, 3 June 2011 | FCP 1 0 2.tar.gz (file) | |
82 KB | FCP v1.0.2 | 7 |
| 13:36, 13 July 2011 | FCP 1 0 3.tar.gz (file) | |
82 KB | FCP v1.0.3 | 1 |
| 12:32, 11 August 2011 | ArumugamBarPlot.png (file) |  |
84 KB | Bar plot of Arumugam et al. enterotype data. | 1 |
| 16:02, 29 November 2009 | STAMP Screenshot.png (file) |  |
87 KB | STAMP v1.0 screenshot (Windows XP). | 2 |
| 13:07, 11 August 2011 | STAMP2 WindowsXP screenshot.png (file) |  |
91 KB | STAMP v2.0.0 screenshot for Windows XP. | 1 |
| 03:55, 17 November 2009 | GenGIS galapagos.jpg (file) |  |
93 KB | Using GenGIS to investigate the distribution of photorhodopsin genes around the Galapagos Islands. | 1 |
| 15:54, 4 December 2009 | STAMP XP Screenshot.png (file) |  |
99 KB | Screen capture of STAMP v1.0 on Microsoft Windows XP. | 2 |
| 18:23, 9 February 2011 | FCP 1 0 0.zip (file) | |
103 KB | FCP v1.0.0 | 10 |
| 14:18, 28 April 2011 | FCP 1 0 1.zip (file) | |
103 KB | FCP v1.0.1 | 1 |
| 20:33, 3 June 2011 | FCP 1 0 2.zip (file) | |
104 KB | FCP v1.0.2 | 8 |
| 13:35, 13 July 2011 | FCP 1 0 3.zip (file) | |
104 KB | FCP v1.0.3 | 1 |
| 01:49, 13 April 2013 | FCP 1 0 4.zip (file) | |
110 KB | FCP v1.0.4 | 3 |
| 23:49, 25 May 2014 | Stamp2 examples.zip (file) | |
113 KB | Examples for STAMP v2 manuscripts. | 1 |
| 05:58, 22 November 2009 | RumenErrorBarPlot.png (file) |  |
125 KB | Extended error bar plot for a pair of bovine rumen microbiomes (data described in Brulc et al., 2009). | 1 |
| 22:48, 10 April 2012 | NetDiv 1 0 0.zip (file) | |
126 KB | 1 | |
| 15:35, 6 December 2011 | EBD 1 1 2.zip (file) | |
131 KB | 1 | |
| 06:12, 22 November 2009 | RedBlack.spf (file) | |
134 KB | SEED profile for Soudin iron mine metagenomes (data originally described in Edwards et al., 2006). | 1 |
| 15:41, 14 June 2012 | EBD 1 0 1.zip (file) | |
147 KB | Express Beta Diversity v1.0.1 | 3 |
| 12:41, 11 August 2011 | STAMP2 Windows7 Screenshot.png (file) |  |
150 KB | STAMP v2.0.0 screenshot for Windows 7. | 2 |
| 13:29, 23 December 2011 | EBD 1 0 0.zip (file) | |
151 KB | Express Beta Diversity v1.0.0 | 2 |
| 14:18, 11 August 2011 | STAMP2 EBPR Aphosphatis ScatterPlot.png (file) |  |
181 KB | Scatterplot with histograms showing the functional profile of A.phosphatis sequences from two EBPR communities. | 1 |
| 23:45, 4 December 2009 | STAMP Windows7 Screenshot.png (file) |  |
211 KB | Screen capture of STAMP v1.0 on Microsoft Windows 7 (x64). | 3 |
| 13:50, 12 August 2011 | STAMP2 OSX Screenshot.png (file) |  |
212 KB | STAMP v2.0.0 screenshot for OS X. | 2 |
| 20:26, 30 November 2009 | STAMP OSX screenshot.png (file) |  |
255 KB | STAMP screenshot (Apple's Mac OS X Leopard). | 1 |
| 14:19, 11 August 2011 | STAMP2 EBPR Aphosphatis ExtendedErrorBar.png (file) |  |
350 KB | Extended errorbar plot of A.phosphatis sequences from two EBPR communities. | 1 |
