# Difference between revisions of "Useful Software"

From Bioinformatics Software

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== Phylogenetic Networks == | == Phylogenetic Networks == | ||

* [http://www.splitstree.org/ SplitsTree] - Computes phylogenetic trees and networks from molecular sequence data, distance matrices, etc. | * [http://www.splitstree.org/ SplitsTree] - Computes phylogenetic trees and networks from molecular sequence data, distance matrices, etc. | ||

− | * [ | + | * [[RaxML]] - ML Phylogenies |

== Statistical Analysis == | == Statistical Analysis == | ||

* [http://www.r-project.org/ R] - The R Project for Statistical Computing | * [http://www.r-project.org/ R] - The R Project for Statistical Computing |

## Revision as of 19:18, 11 June 2008

## Contents

## Machine Learning

- libSVM - Support vector machine library for classification and/or regression.

## Molecular Visualization

- VMD - 3D molecular visualization and animation.

## Phylogenetic Networks

- SplitsTree - Computes phylogenetic trees and networks from molecular sequence data, distance matrices, etc.
- RaxML - ML Phylogenies

## Statistical Analysis

- R - The R Project for Statistical Computing