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• Naive Bayes
  ...features. Suggestions, comments, and bug reports can be sent to Rob Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as '''Parks, D.H., MacDonald, N.J., and Beiko, R.G. (2010). Classify short genomic fragments from unrepresented lineages
  1 KB (214 words) - 04:03, 7 December 2010
• NaiveBayes
  ...features. Suggestions, comments, and bug reports can be sent to Rob Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as '''Parks, D.H., MacDonald, N.J., and Beiko, R.G. (2010). Classify short genomic fragments from unrepresented lineages
  2 KB (236 words) - 04:11, 7 December 2010
• NetworkDiversity
  Parks, D.H. and Beiko, R.G. ''Measuring community similarity with phylogenetic networks''. Accept ...ports can be sent to Donovan Parks (parks [at] cs.dal.ca) or Robert Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as
  2 KB (271 words) - 04:14, 6 March 2013
• STAMP example datasets
  ...following data sets were analyzed in ''Parks, DH, Tyson GW, Hugenholtz P, Beiko RG. (2014). STAMP: Statistical analysis of taxonomic and functional profile The following data sets were analyzed in ''Parks, DH and Beiko, RG. (2010). Identifying biologically relevant differences between metageno
  1 KB (186 words) - 23:56, 25 May 2014
• SPANNER
  * '''Porter, M.S., Beiko, R.G. SPANNER: Taxonomic assignment of sequences using pyramid matching of ...features. Suggestions, comments, and bug reports can be sent to Rob Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as
  4 KB (597 words) - 09:49, 3 April 2013
• RSPR
  '''Whidden, C., Zeh, N., Beiko, R.G. ''Computing the SPR Distance of Binary Rooted Trees in O(2^k n) Time '''Whidden, C., Zeh, N., Beiko, R.G. ''Fixed-Parameter and Approximation Algorithms for Maximum Agreement
  3 KB (474 words) - 18:22, 18 June 2014
• STAMP FAQs
  ...time. If you have a feature suggestion, please send an email to Rob Beiko (beiko [at] cs.dal.ca) with as much information as possible. We are open to collab A: Suggestions, comments, and bug reports can be sent to Rob Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as
  4 KB (744 words) - 23:10, 3 November 2014
• ExpressBetaDiversity
  Parks, D.H. and Beiko, R.G. ''Measures of phylogenetic differentiation provide robust and complem ...ports can be sent to Donovan Parks (parks [at] cs.dal.ca) or Robert Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as
  3 KB (384 words) - 22:24, 6 October 2014
• STAMP v1.08 example datasets
  The following data sets were analyzed in ''Parks, D.H. and Beiko, R.G. (2010). Identifying biologically relevant differences between metagen
  1 KB (175 words) - 04:04, 10 August 2011
• STAMP
  ...inally described in [http://www.ncbi.nlm.nih.gov/pubmed/20130030 Parks and Beiko, 2010]).]] * Parks DH, Tyson GW, Hugenholtz P, Beiko RG. (2014). [http://bioinformatics.oxfordjournals.org/cgi/content/abstract/
  4 KB (588 words) - 04:44, 26 June 2015
• RSPR README
  Whidden, C., Zeh, N., Beiko, R.G. Fixed-Parameter and Approximation Whidden, C., Zeh, N., Beiko, R.G. Supertrees based on the subtree
  16 KB (2,028 words) - 18:24, 18 June 2014
• STAMP v1.08 image gallery
  ...s(data described in [http://www.ncbi.nlm.nih.gov/pubmed/20130030 Parks and Beiko, 2010]).
  2 KB (247 words) - 04:03, 10 August 2011
• Main Page
  * [http://kiwi.cs.dal.ca/~beiko/software-and-data/radie Radié]: a tool that allows characters to be visual ...formatics.org.au/lgt144/ Lateral genetic transfer in 144 genomes dataset] (Beiko et al., Proc. Natl. Acad. Sci. 2005)
  4 KB (601 words) - 23:51, 4 September 2015
• FCP
  * '''Parks, D.H., MacDonald, N.J., and Beiko, R.G. (2011). Classifying short genomic fragments from novel lineages using ...features. Suggestions, comments, and bug reports can be sent to Rob Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as
  4 KB (599 words) - 00:18, 12 July 2015
• RITA
  MacDonald NJ, Parks DH, and Beiko RG. Rapid identification of taxonomic assignments. Accepted to ''Nucleic A If you have any questions or bug reports, please let us know at <beiko@cs.dal.ca>.
  10 KB (1,531 words) - 11:18, 4 April 2012
• STAMP image gallery
  ...s(data described in [http://www.ncbi.nlm.nih.gov/pubmed/20130030 Parks and Beiko, 2010]).
  2 KB (331 words) - 00:59, 9 February 2014
• SPRSupertrees
  '''Whidden, C., Zeh, N., Beiko, R.G. ''Supertrees based on the subtree prune-and-regraft distance''. 2014.
  2 KB (267 words) - 18:27, 18 June 2014
• PICA
  ...features. Suggestions, comments, and bug reports can be sent to Rob Beiko (beiko [at] cs.dal.ca). If reporting a bug, please provide as much information as
  8 KB (1,009 words) - 14:39, 1 June 2010